Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm22711-201ENSMUST00000116890 133 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm12856-201ENSMUST00000119471 1293 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm14585-201ENSMUST00000120713 634 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.41■□□□□ 0.06
Nkx2-3P97334 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm28388-201ENSMUST00000186262 437 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm37299-201ENSMUST00000193951 826 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm43520-201ENSMUST00000197996 164 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm17831-201ENSMUST00000205579 900 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm9132-201ENSMUST00000210182 832 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.41■□□□□ 0.06
Nkx2-3P97334 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-3P97334 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.4■□□□□ 0.06
Nkx2-3P97334 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.4■□□□□ 0.06
Nkx2-3P97334 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Gm16071-201ENSMUST00000119589 793 ntBASIC15.4■□□□□ 0.06
Nkx2-3P97334 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Gm17826-201ENSMUST00000189720 798 ntBASIC15.4■□□□□ 0.06
Nkx2-3P97334 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.4■□□□□ 0.06
Nkx2-3P97334 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.4■□□□□ 0.06
Nkx2-3P97334 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-3P97334 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Nkx2-3P97334 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Gm43447-201ENSMUST00000198471 1535 ntBASIC15.39■□□□□ 0.05
Nkx2-3P97334 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Nkx2-3P97334 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms