Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SgcaP82350 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SgcaP82350 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
SgcaP82350 Gm13616-201ENSMUST00000120600 222 ntBASIC10.35□□□□□ -0.75
SgcaP82350 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.35□□□□□ -0.75
SgcaP82350 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.35□□□□□ -0.75
SgcaP82350 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.35□□□□□ -0.75
SgcaP82350 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SgcaP82350 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SgcaP82350 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SgcaP82350 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.34□□□□□ -0.75
SgcaP82350 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.34□□□□□ -0.75
SgcaP82350 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.34□□□□□ -0.75
SgcaP82350 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SgcaP82350 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.34□□□□□ -0.75
SgcaP82350 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.34□□□□□ -0.75
SgcaP82350 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.34□□□□□ -0.75
SgcaP82350 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.34□□□□□ -0.75
SgcaP82350 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.34□□□□□ -0.75
SgcaP82350 Gm8227-201ENSMUST00000223306 571 ntBASIC10.34□□□□□ -0.75
SgcaP82350 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.34□□□□□ -0.75
SgcaP82350 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.34□□□□□ -0.75
SgcaP82350 Gm20445-201ENSMUST00000061905 565 ntBASIC10.34□□□□□ -0.75
SgcaP82350 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
SgcaP82350 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.34□□□□□ -0.75
SgcaP82350 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SgcaP82350 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.34□□□□□ -0.75
SgcaP82350 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SgcaP82350 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.34□□□□□ -0.75
SgcaP82350 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.34□□□□□ -0.75
SgcaP82350 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SgcaP82350 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.33□□□□□ -0.76
SgcaP82350 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SgcaP82350 Gm12291-201ENSMUST00000121627 311 ntBASIC10.33□□□□□ -0.76
SgcaP82350 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms