Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.03□□□□□ -0.64
SgcbP82349 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SgcbP82349 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Gm23270-201ENSMUST00000104055 131 ntBASIC11.03□□□□□ -0.64
SgcbP82349 Gm25214-201ENSMUST00000104573 129 ntBASIC11.03□□□□□ -0.64
SgcbP82349 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
SgcbP82349 Gm12849-201ENSMUST00000120013 739 ntBASIC11.03□□□□□ -0.64
SgcbP82349 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.03□□□□□ -0.64
SgcbP82349 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
SgcbP82349 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SgcbP82349 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SgcbP82349 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.03□□□□□ -0.64
SgcbP82349 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Gm27046-201ENSMUST00000182160 463 ntBASIC11.03□□□□□ -0.64
SgcbP82349 Gm27243-201ENSMUST00000183964 521 ntBASIC11.03□□□□□ -0.64
SgcbP82349 Gm28882-201ENSMUST00000185504 314 ntBASIC11.03□□□□□ -0.64
SgcbP82349 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC11.03□□□□□ -0.64
SgcbP82349 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.03□□□□□ -0.64
SgcbP82349 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SgcbP82349 Gm39404-201ENSMUST00000216350 313 ntBASIC11.03□□□□□ -0.64
SgcbP82349 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SgcbP82349 Gm10312-201ENSMUST00000078515 489 ntBASIC11.03□□□□□ -0.64
SgcbP82349 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SgcbP82349 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.03□□□□□ -0.64
SgcbP82349 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.03□□□□□ -0.64
SgcbP82349 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SgcbP82349 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcbP82349 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcbP82349 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcbP82349 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcbP82349 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcbP82349 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.02□□□□□ -0.64
SgcbP82349 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcbP82349 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
SgcbP82349 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
SgcbP82349 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcbP82349 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.02□□□□□ -0.64
SgcbP82349 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
SgcbP82349 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.02□□□□□ -0.65
SgcbP82349 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
SgcbP82349 Gm11930-201ENSMUST00000117788 190 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Gm25668-201ENSMUST00000157700 129 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SgcbP82349 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.02□□□□□ -0.65
SgcbP82349 Gm8502-201ENSMUST00000185708 901 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Gm21147-201ENSMUST00000186046 913 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Gm18304-201ENSMUST00000189162 546 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Gm8510-201ENSMUST00000189202 895 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC11.02□□□□□ -0.65
SgcbP82349 Gm2316-201ENSMUST00000190613 921 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Gm43452-201ENSMUST00000201873 991 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.02□□□□□ -0.65
SgcbP82349 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SgcbP82349 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.02□□□□□ -0.65
SgcbP82349 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.02□□□□□ -0.65
SgcbP82349 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcbP82349 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SgcbP82349 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.01□□□□□ -0.65
SgcbP82349 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcbP82349 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcbP82349 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms