Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.27□□□□□ -0.45
Ldb1P70662 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.27□□□□□ -0.45
Ldb1P70662 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Gm13392-201ENSMUST00000117708 150 ntBASIC12.27□□□□□ -0.45
Ldb1P70662 Gm11793-201ENSMUST00000120433 981 ntBASIC12.27□□□□□ -0.45
Ldb1P70662 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.27□□□□□ -0.45
Ldb1P70662 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.27□□□□□ -0.45
Ldb1P70662 Gm37201-201ENSMUST00000191845 523 ntBASIC12.27□□□□□ -0.45
Ldb1P70662 Gm43118-201ENSMUST00000199149 775 ntBASIC12.27□□□□□ -0.45
Ldb1P70662 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.27□□□□□ -0.45
Ldb1P70662 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ldb1P70662 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.27□□□□□ -0.45
Ldb1P70662 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ldb1P70662 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb1P70662 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.27□□□□□ -0.45
Ldb1P70662 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Ldb1P70662 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Ldb1P70662 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Ldb1P70662 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Ldb1P70662 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ldb1P70662 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.26□□□□□ -0.45
Ldb1P70662 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ldb1P70662 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Ldb1P70662 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ldb1P70662 Mir1247-201ENSMUST00000116706 82 ntBASIC12.26□□□□□ -0.45
Ldb1P70662 Gm12058-201ENSMUST00000118614 437 ntBASIC12.26□□□□□ -0.45
Ldb1P70662 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.26□□□□□ -0.45
Ldb1P70662 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.26□□□□□ -0.45
Ldb1P70662 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.26□□□□□ -0.45
Ldb1P70662 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.26□□□□□ -0.45
Ldb1P70662 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ldb1P70662 Gm17420-201ENSMUST00000164753 153 ntBASIC12.26□□□□□ -0.45
Ldb1P70662 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ldb1P70662 Mospd4-201ENSMUST00000180618 576 ntBASIC12.26□□□□□ -0.45
Ldb1P70662 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.26□□□□□ -0.45
Ldb1P70662 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.26□□□□□ -0.45
Ldb1P70662 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ldb1P70662 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ldb1P70662 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.26□□□□□ -0.45
Ldb1P70662 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.26□□□□□ -0.45
Ldb1P70662 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Map1b-203ENSMUST00000223725 2669 ntBASIC12.26□□□□□ -0.45
Ldb1P70662 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.26□□□□□ -0.45
Ldb1P70662 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb1P70662 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.26□□□□□ -0.45
Ldb1P70662 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ldb1P70662 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Ldb1P70662 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ldb1P70662 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.25□□□□□ -0.45
Ldb1P70662 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Ldb1P70662 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.25□□□□□ -0.45
Ldb1P70662 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ldb1P70662 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.25□□□□□ -0.45
Ldb1P70662 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.25□□□□□ -0.45
Ldb1P70662 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ldb1P70662 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb1P70662 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ldb1P70662 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Ldb1P70662 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms