Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.73□□□□□ -0.37
Smad1P70340 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.73□□□□□ -0.37
Smad1P70340 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.73□□□□□ -0.37
Smad1P70340 Gm37489-201ENSMUST00000191883 159 ntBASIC12.73□□□□□ -0.37
Smad1P70340 Gm37042-201ENSMUST00000193816 581 ntBASIC12.73□□□□□ -0.37
Smad1P70340 Gm38158-201ENSMUST00000194617 339 ntBASIC12.73□□□□□ -0.37
Smad1P70340 Gm21769-201ENSMUST00000211922 111 ntBASIC12.73□□□□□ -0.37
Smad1P70340 Gm6082-201ENSMUST00000215204 454 ntBASIC12.73□□□□□ -0.37
Smad1P70340 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.73□□□□□ -0.37
Smad1P70340 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Smad1P70340 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.73□□□□□ -0.37
Smad1P70340 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.73□□□□□ -0.37
Smad1P70340 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.73□□□□□ -0.37
Smad1P70340 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.73□□□□□ -0.37
Smad1P70340 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smad1P70340 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smad1P70340 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.73□□□□□ -0.37
Smad1P70340 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.73□□□□□ -0.37
Smad1P70340 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smad1P70340 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Smad1P70340 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smad1P70340 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
Smad1P70340 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smad1P70340 Gm6023-201ENSMUST00000118217 606 ntBASIC12.72□□□□□ -0.37
Smad1P70340 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.72□□□□□ -0.37
Smad1P70340 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Smad1P70340 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.72□□□□□ -0.37
Smad1P70340 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.72□□□□□ -0.37
Smad1P70340 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Pck2-205ENSMUST00000226352 2784 ntBASIC12.72□□□□□ -0.37
Smad1P70340 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Smad1P70340 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.72□□□□□ -0.37
Smad1P70340 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smad1P70340 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Smad1P70340 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smad1P70340 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Smad1P70340 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Smad1P70340 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.71□□□□□ -0.37
Smad1P70340 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.71□□□□□ -0.37
Smad1P70340 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Snord83b-201ENSMUST00000104546 94 ntBASIC12.71□□□□□ -0.37
Smad1P70340 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.71□□□□□ -0.37
Smad1P70340 Gm4986-201ENSMUST00000119731 549 ntBASIC12.71□□□□□ -0.37
Smad1P70340 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.71□□□□□ -0.37
Smad1P70340 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.71□□□□□ -0.37
Smad1P70340 Gm22121-201ENSMUST00000175148 54 ntBASIC12.71□□□□□ -0.37
Smad1P70340 Gm6222-202ENSMUST00000182143 629 ntBASIC12.71□□□□□ -0.37
Smad1P70340 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smad1P70340 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.71□□□□□ -0.37
Smad1P70340 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms