Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkcbP68404 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkcbP68404 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkcbP68404 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PrkcbP68404 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PrkcbP68404 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkcbP68404 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.33□□□□□ -0.28
PrkcbP68404 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkcbP68404 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PrkcbP68404 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PrkcbP68404 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.32□□□□□ -0.28
PrkcbP68404 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm14277-201ENSMUST00000121195 360 ntBASIC13.32□□□□□ -0.28
PrkcbP68404 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.32□□□□□ -0.28
PrkcbP68404 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm16570-201ENSMUST00000161951 436 ntBASIC13.32□□□□□ -0.28
PrkcbP68404 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
PrkcbP68404 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm27341-201ENSMUST00000183570 106 ntBASIC13.32□□□□□ -0.28
PrkcbP68404 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.32□□□□□ -0.28
PrkcbP68404 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm45433-201ENSMUST00000209386 247 ntBASIC13.32□□□□□ -0.28
PrkcbP68404 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PrkcbP68404 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.32□□□□□ -0.28
PrkcbP68404 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.32□□□□□ -0.28
PrkcbP68404 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
PrkcbP68404 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PrkcbP68404 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.32□□□□□ -0.28
PrkcbP68404 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.31□□□□□ -0.28
PrkcbP68404 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.31□□□□□ -0.28
PrkcbP68404 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.31□□□□□ -0.28
PrkcbP68404 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PrkcbP68404 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.31□□□□□ -0.28
PrkcbP68404 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.31□□□□□ -0.28
PrkcbP68404 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PrkcbP68404 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
PrkcbP68404 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
PrkcbP68404 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.3□□□□□ -0.28
PrkcbP68404 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PrkcbP68404 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PrkcbP68404 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.3□□□□□ -0.28
PrkcbP68404 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.3□□□□□ -0.28
PrkcbP68404 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.3□□□□□ -0.28
PrkcbP68404 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.3□□□□□ -0.28
PrkcbP68404 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PrkcbP68404 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PrkcbP68404 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Gm14028-201ENSMUST00000117434 479 ntBASIC13.3□□□□□ -0.28
PrkcbP68404 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PrkcbP68404 Gm24749-201ENSMUST00000157838 343 ntBASIC13.3□□□□□ -0.28
PrkcbP68404 Rprl1-201ENSMUST00000158050 327 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms