Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ybx1P62960 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ybx1P62960 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Ybx1P62960 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ybx1P62960 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ybx1P62960 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Gm15131-201ENSMUST00000119124 595 ntBASIC12.62□□□□□ -0.39
Ybx1P62960 Gm15782-201ENSMUST00000121073 445 ntBASIC12.62□□□□□ -0.39
Ybx1P62960 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Gm27438-201ENSMUST00000183480 110 ntBASIC12.62□□□□□ -0.39
Ybx1P62960 Gm18038-201ENSMUST00000197900 485 ntBASIC12.62□□□□□ -0.39
Ybx1P62960 Gm44958-201ENSMUST00000203734 736 ntBASIC12.62□□□□□ -0.39
Ybx1P62960 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.62□□□□□ -0.39
Ybx1P62960 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ybx1P62960 Gm21811-201ENSMUST00000096485 930 ntBASIC12.62□□□□□ -0.39
Ybx1P62960 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ybx1P62960 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ybx1P62960 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ybx1P62960 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ybx1P62960 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Gm11667-201ENSMUST00000119828 486 ntBASIC12.61□□□□□ -0.39
Ybx1P62960 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.61□□□□□ -0.39
Ybx1P62960 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Ybx1P62960 Gm25881-201ENSMUST00000157783 103 ntBASIC12.61□□□□□ -0.39
Ybx1P62960 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.61□□□□□ -0.39
Ybx1P62960 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.61□□□□□ -0.39
Ybx1P62960 Gm44545-201ENSMUST00000208262 746 ntBASIC12.61□□□□□ -0.39
Ybx1P62960 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.61□□□□□ -0.39
Ybx1P62960 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.61□□□□□ -0.39
Ybx1P62960 Gm270-201ENSMUST00000223010 976 ntBASIC12.61□□□□□ -0.39
Ybx1P62960 Gm5455-201ENSMUST00000058710 715 ntBASIC12.61□□□□□ -0.39
Ybx1P62960 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ybx1P62960 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.61□□□□□ -0.39
Ybx1P62960 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ybx1P62960 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 561.6 ms