Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.9□□□□□ -0.66
Sec61a1P61620 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.9□□□□□ -0.66
Sec61a1P61620 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61a1P61620 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61a1P61620 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61a1P61620 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61a1P61620 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61a1P61620 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61a1P61620 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61a1P61620 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sec61a1P61620 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm23931-201ENSMUST00000103842 109 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.89□□□□□ -0.67
Sec61a1P61620 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm12384-201ENSMUST00000119228 919 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm1335-201ENSMUST00000121653 386 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm27682-201ENSMUST00000183930 110 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.89□□□□□ -0.67
Sec61a1P61620 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61a1P61620 Map1b-203ENSMUST00000223725 2669 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.89□□□□□ -0.67
Sec61a1P61620 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Sec61a1P61620 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Gm37497-201ENSMUST00000195830 798 ntBASIC10.88□□□□□ -0.67
Sec61a1P61620 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.88□□□□□ -0.67
Sec61a1P61620 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.88□□□□□ -0.67
Sec61a1P61620 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61a1P61620 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.88□□□□□ -0.67
Sec61a1P61620 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61a1P61620 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 271.8 ms