Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm12314-201ENSMUST00000118104 538 ntBASIC12.59□□□□□ -0.39
Tubgcp3P58854 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.59□□□□□ -0.39
Tubgcp3P58854 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.59□□□□□ -0.39
Tubgcp3P58854 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubgcp3P58854 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tubgcp3P58854 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Tubgcp3P58854 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tubgcp3P58854 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Tubgcp3P58854 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tubgcp3P58854 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tubgcp3P58854 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Gm13342-201ENSMUST00000121055 207 ntBASIC12.58□□□□□ -0.4
Tubgcp3P58854 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Gm13316-201ENSMUST00000140537 691 ntBASIC12.58□□□□□ -0.4
Tubgcp3P58854 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.58□□□□□ -0.4
Tubgcp3P58854 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.58□□□□□ -0.4
Tubgcp3P58854 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Tubgcp3P58854 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.57□□□□□ -0.4
Tubgcp3P58854 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.57□□□□□ -0.4
Tubgcp3P58854 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.57□□□□□ -0.4
Tubgcp3P58854 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubgcp3P58854 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms