Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tpm2P58774 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.17□□□□□ -0.14
Tpm2P58774 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Mir7654-201ENSMUST00000185082 70 ntBASIC14.17□□□□□ -0.14
Tpm2P58774 Gm37917-201ENSMUST00000194711 392 ntBASIC14.17□□□□□ -0.14
Tpm2P58774 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.17□□□□□ -0.14
Tpm2P58774 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Tpm2P58774 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Tpm2P58774 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tpm2P58774 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tpm2P58774 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 Gm9466-201ENSMUST00000218144 2246 ntBASIC14.17□□□□□ -0.14
Tpm2P58774 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm2P58774 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC14.16□□□□□ -0.14
Tpm2P58774 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tpm2P58774 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tpm2P58774 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC14.16□□□□□ -0.14
Tpm2P58774 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.16□□□□□ -0.14
Tpm2P58774 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.16□□□□□ -0.14
Tpm2P58774 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tpm2P58774 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Gm6152-201ENSMUST00000151704 340 ntBASIC14.16□□□□□ -0.14
Tpm2P58774 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Tpm2P58774 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.16□□□□□ -0.14
Tpm2P58774 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.16□□□□□ -0.14
Tpm2P58774 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.16□□□□□ -0.14
Tpm2P58774 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.16□□□□□ -0.14
Tpm2P58774 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tpm2P58774 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tpm2P58774 AC122291.1-201ENSMUST00000228937 5748 ntBASIC14.16□□□□□ -0.14
Tpm2P58774 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.16□□□□□ -0.14
Tpm2P58774 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm2P58774 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tpm2P58774 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tpm2P58774 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tpm2P58774 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Tpm2P58774 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Tpm2P58774 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.15□□□□□ -0.14
Tpm2P58774 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.15□□□□□ -0.14
Tpm2P58774 Mir6392-201ENSMUST00000184924 108 ntBASIC14.15□□□□□ -0.14
Tpm2P58774 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Gm8227-201ENSMUST00000223306 571 ntBASIC14.15□□□□□ -0.14
Tpm2P58774 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Tpm2P58774 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tpm2P58774 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm2P58774 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tpm2P58774 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tpm2P58774 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm2P58774 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms