Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.96□□□□□ -0.82
Sssca1P56873 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.82
Sssca1P56873 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Sssca1P56873 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sssca1P56873 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Sssca1P56873 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.95□□□□□ -0.82
Sssca1P56873 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.95□□□□□ -0.82
Sssca1P56873 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Gm28911-201ENSMUST00000188837 117 ntBASIC9.95□□□□□ -0.82
Sssca1P56873 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Gm7287-201ENSMUST00000205267 602 ntBASIC9.95□□□□□ -0.82
Sssca1P56873 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.95□□□□□ -0.82
Sssca1P56873 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.95□□□□□ -0.82
Sssca1P56873 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Sssca1P56873 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Sssca1P56873 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Sssca1P56873 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Sssca1P56873 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sssca1P56873 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.94□□□□□ -0.82
Sssca1P56873 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Sssca1P56873 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Sssca1P56873 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Sssca1P56873 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.94□□□□□ -0.82
Sssca1P56873 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Sssca1P56873 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Sssca1P56873 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC9.94□□□□□ -0.82
Sssca1P56873 Gm13369-201ENSMUST00000119442 987 ntBASIC9.94□□□□□ -0.82
Sssca1P56873 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.94□□□□□ -0.82
Sssca1P56873 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Sssca1P56873 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.94□□□□□ -0.82
Sssca1P56873 Mir6977-201ENSMUST00000184960 64 ntBASIC9.94□□□□□ -0.82
Sssca1P56873 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.94□□□□□ -0.82
Sssca1P56873 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.94□□□□□ -0.82
Sssca1P56873 Gm37497-201ENSMUST00000195830 798 ntBASIC9.94□□□□□ -0.82
Sssca1P56873 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Sssca1P56873 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sssca1P56873 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.94□□□□□ -0.82
Sssca1P56873 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms