Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rrp1P56183 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rrp1P56183 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.9□□□□□ -0.19
Rrp1P56183 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Rrp1P56183 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rrp1P56183 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Rrp1P56183 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rrp1P56183 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.89□□□□□ -0.19
Rrp1P56183 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Gm12314-201ENSMUST00000118104 538 ntBASIC13.89□□□□□ -0.19
Rrp1P56183 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.89□□□□□ -0.19
Rrp1P56183 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.89□□□□□ -0.19
Rrp1P56183 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.89□□□□□ -0.19
Rrp1P56183 Gm26927-201ENSMUST00000182385 965 ntBASIC13.89□□□□□ -0.19
Rrp1P56183 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Rrp1P56183 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Rrp1P56183 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rrp1P56183 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
Rrp1P56183 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.89□□□□□ -0.19
Rrp1P56183 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rrp1P56183 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rrp1P56183 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rrp1P56183 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.88□□□□□ -0.19
Rrp1P56183 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rrp1P56183 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rrp1P56183 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Rrp1P56183 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.88□□□□□ -0.19
Rrp1P56183 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.88□□□□□ -0.19
Rrp1P56183 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Gm17150-201ENSMUST00000165577 381 ntBASIC13.88□□□□□ -0.19
Rrp1P56183 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rrp1P56183 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.88□□□□□ -0.19
Rrp1P56183 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Rrp1P56183 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.88□□□□□ -0.19
Rrp1P56183 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rrp1P56183 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.88□□□□□ -0.19
Rrp1P56183 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rrp1P56183 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rrp1P56183 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms