Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atxn1P54254 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atxn1P54254 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.44
Atxn1P54254 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Atxn1P54254 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atxn1P54254 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atxn1P54254 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atxn1P54254 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Atxn1P54254 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Atxn1P54254 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atxn1P54254 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Atxn1P54254 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atxn1P54254 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atxn1P54254 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.27□□□□□ -0.45
Atxn1P54254 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.27□□□□□ -0.45
Atxn1P54254 Gm23251-201ENSMUST00000103773 110 ntBASIC12.27□□□□□ -0.45
Atxn1P54254 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Gm25072-201ENSMUST00000175233 235 ntBASIC12.27□□□□□ -0.45
Atxn1P54254 Mir6546-201ENSMUST00000184460 62 ntBASIC12.27□□□□□ -0.45
Atxn1P54254 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.27□□□□□ -0.45
Atxn1P54254 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.27□□□□□ -0.45
Atxn1P54254 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.27□□□□□ -0.45
Atxn1P54254 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.27□□□□□ -0.45
Atxn1P54254 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Gm10076-201ENSMUST00000073238 384 ntBASIC12.27□□□□□ -0.45
Atxn1P54254 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Atxn1P54254 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.27□□□□□ -0.45
Atxn1P54254 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.27□□□□□ -0.45
Atxn1P54254 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Atxn1P54254 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atxn1P54254 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Atxn1P54254 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Atxn1P54254 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Gm12015-201ENSMUST00000117065 843 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Gm13035-201ENSMUST00000117496 342 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Gm24845-201ENSMUST00000158034 109 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.26□□□□□ -0.45
Atxn1P54254 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atxn1P54254 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.26□□□□□ -0.45
Atxn1P54254 Gm28071-201ENSMUST00000190355 478 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Gm34023-201ENSMUST00000195539 217 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.26□□□□□ -0.45
Atxn1P54254 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Atxn1P54254 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Atxn1P54254 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.26□□□□□ -0.45
Atxn1P54254 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atxn1P54254 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Atxn1P54254 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Atxn1P54254 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.25□□□□□ -0.45
Atxn1P54254 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Atxn1P54254 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms