Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox1P53783 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.59□□□□□ -0.39
Sox1P53783 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox1P53783 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox1P53783 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox1P53783 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.58□□□□□ -0.39
Sox1P53783 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Sox1P53783 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox1P53783 Gm14193-201ENSMUST00000105067 153 ntBASIC12.58□□□□□ -0.4
Sox1P53783 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Gm12419-201ENSMUST00000116649 636 ntBASIC12.58□□□□□ -0.4
Sox1P53783 Gm3329-201ENSMUST00000159873 556 ntBASIC12.58□□□□□ -0.4
Sox1P53783 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Gm18801-201ENSMUST00000186616 536 ntBASIC12.58□□□□□ -0.4
Sox1P53783 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Gm6390-201ENSMUST00000215034 589 ntBASIC12.58□□□□□ -0.4
Sox1P53783 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox1P53783 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.58□□□□□ -0.4
Sox1P53783 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.58□□□□□ -0.4
Sox1P53783 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.58□□□□□ -0.4
Sox1P53783 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox1P53783 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sox1P53783 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Matn2-206ENSMUST00000228570 2798 ntBASIC12.58□□□□□ -0.4
Sox1P53783 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox1P53783 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sox1P53783 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox1P53783 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox1P53783 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Sox1P53783 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox1P53783 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Sox1P53783 Gm14807-201ENSMUST00000116640 983 ntBASIC12.57□□□□□ -0.4
Sox1P53783 Gm12579-201ENSMUST00000118040 783 ntBASIC12.57□□□□□ -0.4
Sox1P53783 Gm8731-201ENSMUST00000118088 412 ntBASIC12.57□□□□□ -0.4
Sox1P53783 Gm11783-201ENSMUST00000119549 885 ntBASIC12.57□□□□□ -0.4
Sox1P53783 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.57□□□□□ -0.4
Sox1P53783 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox1P53783 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox1P53783 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.57□□□□□ -0.4
Sox1P53783 Gm18367-201ENSMUST00000176139 600 ntBASIC12.57□□□□□ -0.4
Sox1P53783 Gm11942-201ENSMUST00000180255 345 ntBASIC12.57□□□□□ -0.4
Sox1P53783 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox1P53783 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox1P53783 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox1P53783 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.57□□□□□ -0.4
Sox1P53783 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox1P53783 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox1P53783 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox1P53783 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox1P53783 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox1P53783 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms