Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.86□□□□□ -0.51
Prox1P48437 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prox1P48437 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prox1P48437 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prox1P48437 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prox1P48437 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prox1P48437 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prox1P48437 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.86□□□□□ -0.51
Prox1P48437 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Prox1P48437 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Prox1P48437 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prox1P48437 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Prox1P48437 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.86□□□□□ -0.51
Prox1P48437 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prox1P48437 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.85□□□□□ -0.51
Prox1P48437 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Prox1P48437 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.85□□□□□ -0.51
Prox1P48437 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.85□□□□□ -0.51
Prox1P48437 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Prox1P48437 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.85□□□□□ -0.51
Prox1P48437 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Prox1P48437 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.85□□□□□ -0.51
Prox1P48437 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.85□□□□□ -0.51
Prox1P48437 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.85□□□□□ -0.51
Prox1P48437 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prox1P48437 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.84□□□□□ -0.51
Prox1P48437 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.84□□□□□ -0.51
Prox1P48437 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.84□□□□□ -0.51
Prox1P48437 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Gm12928-201ENSMUST00000117115 573 ntBASIC11.84□□□□□ -0.51
Prox1P48437 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.84□□□□□ -0.51
Prox1P48437 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.84□□□□□ -0.51
Prox1P48437 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Mir339-201ENSMUST00000083659 96 ntBASIC11.84□□□□□ -0.51
Prox1P48437 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.84□□□□□ -0.51
Prox1P48437 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Prox1P48437 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Prox1P48437 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Prox1P48437 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Prox1P48437 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.83□□□□□ -0.51
Prox1P48437 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Prox1P48437 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Prox1P48437 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Prox1P48437 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.83□□□□□ -0.52
Prox1P48437 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.83□□□□□ -0.52
Prox1P48437 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Prox1P48437 Gm11618-201ENSMUST00000117946 267 ntBASIC11.83□□□□□ -0.52
Prox1P48437 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.83□□□□□ -0.52
Prox1P48437 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.83□□□□□ -0.52
Prox1P48437 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.83□□□□□ -0.52
Prox1P48437 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.83□□□□□ -0.52
Prox1P48437 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Prox1P48437 Gm9908-201ENSMUST00000211534 448 ntBASIC11.83□□□□□ -0.52
Prox1P48437 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.83□□□□□ -0.52
Prox1P48437 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms