Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Cog3-203ENSMUST00000227473 4197 ntBASIC11.15□□□□□ -0.62
Rfx3P48381 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.15□□□□□ -0.62
Rfx3P48381 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Gm26927-201ENSMUST00000182385 965 ntBASIC11.15□□□□□ -0.62
Rfx3P48381 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.15□□□□□ -0.62
Rfx3P48381 Gm8227-201ENSMUST00000223306 571 ntBASIC11.15□□□□□ -0.62
Rfx3P48381 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.15□□□□□ -0.62
Rfx3P48381 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rfx3P48381 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Gm26035-201ENSMUST00000083065 308 ntBASIC11.15□□□□□ -0.62
Rfx3P48381 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rfx3P48381 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rfx3P48381 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rfx3P48381 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Rfx3P48381 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rfx3P48381 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rfx3P48381 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Rfx3P48381 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.15□□□□□ -0.63
Rfx3P48381 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rfx3P48381 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfx3P48381 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rfx3P48381 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfx3P48381 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfx3P48381 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Rfx3P48381 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Gm16177-201ENSMUST00000120728 718 ntBASIC11.14□□□□□ -0.63
Rfx3P48381 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.14□□□□□ -0.63
Rfx3P48381 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfx3P48381 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.14□□□□□ -0.63
Rfx3P48381 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Rfx3P48381 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.14□□□□□ -0.63
Rfx3P48381 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfx3P48381 Gm7029-201ENSMUST00000173226 450 ntBASIC11.14□□□□□ -0.63
Rfx3P48381 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.14□□□□□ -0.63
Rfx3P48381 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rfx3P48381 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Gm29127-201ENSMUST00000188304 517 ntBASIC11.14□□□□□ -0.63
Rfx3P48381 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Gm24526-201ENSMUST00000082921 158 ntBASIC11.14□□□□□ -0.63
Rfx3P48381 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rfx3P48381 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.14□□□□□ -0.63
Rfx3P48381 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.14□□□□□ -0.63
Rfx3P48381 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Rfx3P48381 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.14□□□□□ -0.63
Rfx3P48381 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.14□□□□□ -0.63
Rfx3P48381 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rfx3P48381 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rfx3P48381 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfx3P48381 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfx3P48381 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.13□□□□□ -0.63
Rfx3P48381 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.13□□□□□ -0.63
Rfx3P48381 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.13□□□□□ -0.63
Rfx3P48381 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rfx3P48381 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfx3P48381 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfx3P48381 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rfx3P48381 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rfx3P48381 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rfx3P48381 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms