Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox18P43680 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox18P43680 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox18P43680 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Gm12601-201ENSMUST00000118994 846 ntBASIC11.99□□□□□ -0.49
Sox18P43680 Gm14999-201ENSMUST00000121039 624 ntBASIC11.99□□□□□ -0.49
Sox18P43680 Gm15881-201ENSMUST00000148792 942 ntBASIC11.99□□□□□ -0.49
Sox18P43680 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Gm22764-201ENSMUST00000158370 92 ntBASIC11.99□□□□□ -0.49
Sox18P43680 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Gm8018-201ENSMUST00000173536 789 ntBASIC11.99□□□□□ -0.49
Sox18P43680 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Sox18P43680 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.99□□□□□ -0.49
Sox18P43680 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox18P43680 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Gm43787-201ENSMUST00000197792 1037 ntBASIC11.99□□□□□ -0.49
Sox18P43680 Gm17889-201ENSMUST00000198410 598 ntBASIC11.99□□□□□ -0.49
Sox18P43680 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Sox18P43680 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC11.99□□□□□ -0.49
Sox18P43680 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox18P43680 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.99□□□□□ -0.49
Sox18P43680 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.99□□□□□ -0.49
Sox18P43680 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox18P43680 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox18P43680 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Sox18P43680 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox18P43680 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.99□□□□□ -0.49
Sox18P43680 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.99□□□□□ -0.49
Sox18P43680 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.98□□□□□ -0.49
Sox18P43680 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox18P43680 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.98□□□□□ -0.49
Sox18P43680 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.98□□□□□ -0.49
Sox18P43680 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC11.98□□□□□ -0.49
Sox18P43680 Gm25072-201ENSMUST00000175233 235 ntBASIC11.98□□□□□ -0.49
Sox18P43680 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sox18P43680 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox18P43680 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.98□□□□□ -0.49
Sox18P43680 Gm21139-201ENSMUST00000186594 877 ntBASIC11.98□□□□□ -0.49
Sox18P43680 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Gm37576-201ENSMUST00000194228 372 ntBASIC11.98□□□□□ -0.49
Sox18P43680 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.98□□□□□ -0.49
Sox18P43680 AC132384.10-201ENSMUST00000217862 1204 ntBASIC11.98□□□□□ -0.49
Sox18P43680 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.98□□□□□ -0.49
Sox18P43680 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.98□□□□□ -0.49
Sox18P43680 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox18P43680 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox18P43680 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox18P43680 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox18P43680 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sox18P43680 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.97□□□□□ -0.49
Sox18P43680 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox18P43680 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox18P43680 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox18P43680 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms