Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm19994-201ENSMUST00000217086 586 ntBASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm8712-201ENSMUST00000221090 701 ntBASIC11.29□□□□□ -0.6
Nkx2-2P42586 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.29□□□□□ -0.6
Nkx2-2P42586 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Nkx2-2P42586 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm15547-201ENSMUST00000122152 333 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm31256-201ENSMUST00000194705 506 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm45865-201ENSMUST00000211815 945 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Cts7-204ENSMUST00000225321 1257 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.28□□□□□ -0.6
Nkx2-2P42586 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Nkx2-2P42586 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx2-2P42586 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-2P42586 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-2P42586 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-2P42586 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx2-2P42586 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-2P42586 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-2P42586 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx2-2P42586 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nkx2-2P42586 Gm23270-201ENSMUST00000104055 131 ntBASIC11.27□□□□□ -0.61
Nkx2-2P42586 Gm38266-201ENSMUST00000194931 421 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms