Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.83□□□□□ -0.52
Tnfsf9P41274 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.83□□□□□ -0.52
Tnfsf9P41274 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Gm11439-201ENSMUST00000118598 409 ntBASIC11.83□□□□□ -0.52
Tnfsf9P41274 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.83□□□□□ -0.52
Tnfsf9P41274 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Rps4l-202ENSMUST00000204242 789 ntBASIC11.83□□□□□ -0.52
Tnfsf9P41274 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfsf9P41274 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm13996-201ENSMUST00000118456 430 ntBASIC11.82□□□□□ -0.52
Tnfsf9P41274 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.82□□□□□ -0.52
Tnfsf9P41274 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm27341-201ENSMUST00000183570 106 ntBASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm45224-201ENSMUST00000208203 414 ntBASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm19208-201ENSMUST00000213861 912 ntBASIC11.82□□□□□ -0.52
Tnfsf9P41274 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.82□□□□□ -0.52
Tnfsf9P41274 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.82□□□□□ -0.52
Tnfsf9P41274 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf9P41274 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfsf9P41274 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.81□□□□□ -0.52
Tnfsf9P41274 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Tnfsf9P41274 Gm16505-201ENSMUST00000179981 232 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms