Protein–RNA interactions for Protein: P40694

Ighmbp2, DNA-binding protein SMUBP-2, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighmbp2P40694 Gm28693-202ENSMUST00000190758 331 ntBASIC13.22□□□□□ -0.29
Ighmbp2P40694 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.22□□□□□ -0.29
Ighmbp2P40694 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighmbp2P40694 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.22□□□□□ -0.29
Ighmbp2P40694 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ighmbp2P40694 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighmbp2P40694 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ighmbp2P40694 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.22□□□□□ -0.29
Ighmbp2P40694 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighmbp2P40694 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighmbp2P40694 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.22□□□□□ -0.29
Ighmbp2P40694 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.22□□□□□ -0.29
Ighmbp2P40694 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighmbp2P40694 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.22□□□□□ -0.29
Ighmbp2P40694 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.21□□□□□ -0.29
Ighmbp2P40694 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Gm6152-201ENSMUST00000151704 340 ntBASIC13.21□□□□□ -0.29
Ighmbp2P40694 Proscos-202ENSMUST00000178990 666 ntBASIC13.21□□□□□ -0.29
Ighmbp2P40694 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Gm27331-201ENSMUST00000183705 60 ntBASIC13.21□□□□□ -0.29
Ighmbp2P40694 Gm27390-201ENSMUST00000184516 176 ntBASIC13.21□□□□□ -0.29
Ighmbp2P40694 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Gm29705-201ENSMUST00000212598 474 ntBASIC13.21□□□□□ -0.29
Ighmbp2P40694 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.21□□□□□ -0.29
Ighmbp2P40694 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighmbp2P40694 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.3
Ighmbp2P40694 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.2□□□□□ -0.3
Ighmbp2P40694 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Mir8109-201ENSMUST00000184375 117 ntBASIC13.2□□□□□ -0.3
Ighmbp2P40694 Gm18827-201ENSMUST00000188341 790 ntBASIC13.2□□□□□ -0.3
Ighmbp2P40694 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Gm43822-201ENSMUST00000200285 476 ntBASIC13.2□□□□□ -0.3
Ighmbp2P40694 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighmbp2P40694 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms