Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sox6P40645 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.6□□□□□ -0.55
Sox6P40645 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sox6P40645 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox6P40645 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sox6P40645 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Sox6P40645 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.6□□□□□ -0.55
Sox6P40645 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.6□□□□□ -0.55
Sox6P40645 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.6□□□□□ -0.55
Sox6P40645 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.6□□□□□ -0.55
Sox6P40645 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.6□□□□□ -0.55
Sox6P40645 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sox6P40645 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Sox6P40645 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sox6P40645 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox6P40645 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox6P40645 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.59□□□□□ -0.55
Sox6P40645 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Sox6P40645 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox6P40645 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox6P40645 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sox6P40645 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Mir686-201ENSMUST00000102174 109 ntBASIC11.59□□□□□ -0.55
Sox6P40645 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.59□□□□□ -0.55
Sox6P40645 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Sox6P40645 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox6P40645 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.59□□□□□ -0.55
Sox6P40645 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.59□□□□□ -0.55
Sox6P40645 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox6P40645 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox6P40645 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox6P40645 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox6P40645 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Sox6P40645 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.58□□□□□ -0.56
Sox6P40645 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox6P40645 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Sox6P40645 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox6P40645 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox6P40645 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox6P40645 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
Sox6P40645 Gm12384-201ENSMUST00000119228 919 ntBASIC11.58□□□□□ -0.56
Sox6P40645 Gm16177-201ENSMUST00000120728 718 ntBASIC11.58□□□□□ -0.56
Sox6P40645 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox6P40645 Gm45784-201ENSMUST00000188360 142 ntBASIC11.58□□□□□ -0.56
Sox6P40645 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.58□□□□□ -0.56
Sox6P40645 Gm18062-201ENSMUST00000208020 547 ntBASIC11.58□□□□□ -0.56
Sox6P40645 Gm18055-201ENSMUST00000208254 547 ntBASIC11.58□□□□□ -0.56
Sox6P40645 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox6P40645 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox6P40645 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms