Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Chd1P40201 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Chd1P40201 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Chd1P40201 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Chd1P40201 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC18.04■□□□□ 0.48
Chd1P40201 AC107763.1-201ENSMUST00000226082 1365 ntBASIC18.04■□□□□ 0.48
Chd1P40201 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC18.04■□□□□ 0.48
Chd1P40201 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC18.04■□□□□ 0.48
Chd1P40201 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Chd1P40201 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC18.04■□□□□ 0.48
Chd1P40201 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1P40201 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chd1P40201 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Gm6114-201ENSMUST00000182472 968 ntBASIC18.03■□□□□ 0.48
Chd1P40201 Gm31274-201ENSMUST00000197356 229 ntBASIC18.03■□□□□ 0.48
Chd1P40201 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC18.03■□□□□ 0.48
Chd1P40201 Gm7939-201ENSMUST00000201233 1050 ntBASIC18.03■□□□□ 0.48
Chd1P40201 BC080696-201ENSMUST00000202858 1218 ntBASIC18.03■□□□□ 0.48
Chd1P40201 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC18.03■□□□□ 0.48
Chd1P40201 AC115304.2-201ENSMUST00000226399 332 ntBASIC18.03■□□□□ 0.48
Chd1P40201 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Chd1P40201 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chd1P40201 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC18.03■□□□□ 0.48
Chd1P40201 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC18.03■□□□□ 0.48
Chd1P40201 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC18.03■□□□□ 0.48
Chd1P40201 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC18.03■□□□□ 0.48
Chd1P40201 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC18.03■□□□□ 0.48
Chd1P40201 Gm26047-201ENSMUST00000157308 113 ntBASIC18.03■□□□□ 0.48
Chd1P40201 Gm4982-201ENSMUST00000160440 1098 ntBASIC18.03■□□□□ 0.48
Chd1P40201 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC18.03■□□□□ 0.48
Chd1P40201 Gm26047-202ENSMUST00000198840 115 ntBASIC18.03■□□□□ 0.48
Chd1P40201 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chd1P40201 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chd1P40201 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1P40201 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Gm9796-201ENSMUST00000062249 2250 ntBASIC18.02■□□□□ 0.48
Chd1P40201 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chd1P40201 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Chd1P40201 Mir453-201ENSMUST00000104732 82 ntBASIC18.02■□□□□ 0.48
Chd1P40201 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Chd1P40201 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Chd1P40201 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Chd1P40201 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Chd1P40201 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Chd1P40201 AC164556.1-201ENSMUST00000221318 751 ntBASIC18.02■□□□□ 0.48
Chd1P40201 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Chd1P40201 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chd1P40201 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Chd1P40201 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1P40201 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd1P40201 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd1P40201 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd1P40201 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd1P40201 Gm15519-201ENSMUST00000120088 1566 ntBASIC18.02■□□□□ 0.47
Chd1P40201 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd1P40201 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1P40201 Map1b-203ENSMUST00000223725 2669 ntBASIC18.01■□□□□ 0.47
Chd1P40201 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms