Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Fen1P39749 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Gm8805-201ENSMUST00000117848 313 ntBASIC12.41□□□□□ -0.42
Fen1P39749 Gm15824-201ENSMUST00000119516 955 ntBASIC12.41□□□□□ -0.42
Fen1P39749 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.41□□□□□ -0.42
Fen1P39749 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Fen1P39749 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.41□□□□□ -0.42
Fen1P39749 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Fen1P39749 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.41□□□□□ -0.42
Fen1P39749 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.41□□□□□ -0.42
Fen1P39749 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fen1P39749 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.41□□□□□ -0.42
Fen1P39749 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Fen1P39749 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Fen1P39749 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Fen1P39749 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Fen1P39749 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Fen1P39749 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
Fen1P39749 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.4□□□□□ -0.42
Fen1P39749 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.4□□□□□ -0.42
Fen1P39749 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.4□□□□□ -0.42
Fen1P39749 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.4□□□□□ -0.42
Fen1P39749 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Fen1P39749 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.4□□□□□ -0.42
Fen1P39749 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Fen1P39749 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.4□□□□□ -0.42
Fen1P39749 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.4□□□□□ -0.42
Fen1P39749 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Gm18473-201ENSMUST00000220543 868 ntBASIC12.4□□□□□ -0.42
Fen1P39749 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Fen1P39749 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Fen1P39749 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fen1P39749 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Fen1P39749 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Fen1P39749 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Fen1P39749 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Fen1P39749 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Fen1P39749 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Fen1P39749 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.39□□□□□ -0.43
Fen1P39749 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fen1P39749 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fen1P39749 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fen1P39749 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fen1P39749 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Fen1P39749 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fen1P39749 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Fen1P39749 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.39□□□□□ -0.43
Fen1P39749 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Fen1P39749 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Fen1P39749 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Fen1P39749 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms