Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.18□□□□□ -0.78
Cdkn1aP39689 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.18□□□□□ -0.78
Cdkn1aP39689 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.18□□□□□ -0.78
Cdkn1aP39689 Gm45433-201ENSMUST00000209386 247 ntBASIC10.18□□□□□ -0.78
Cdkn1aP39689 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.18□□□□□ -0.78
Cdkn1aP39689 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.18□□□□□ -0.78
Cdkn1aP39689 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cdkn1aP39689 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.17□□□□□ -0.78
Cdkn1aP39689 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Gm11989-201ENSMUST00000117240 672 ntBASIC10.17□□□□□ -0.78
Cdkn1aP39689 Gm11362-201ENSMUST00000118838 850 ntBASIC10.17□□□□□ -0.78
Cdkn1aP39689 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Gm24749-201ENSMUST00000157838 343 ntBASIC10.17□□□□□ -0.78
Cdkn1aP39689 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.17□□□□□ -0.78
Cdkn1aP39689 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.17□□□□□ -0.78
Cdkn1aP39689 Gm26461-201ENSMUST00000175064 290 ntBASIC10.17□□□□□ -0.78
Cdkn1aP39689 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.17□□□□□ -0.78
Cdkn1aP39689 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.17□□□□□ -0.78
Cdkn1aP39689 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cdkn1aP39689 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cdkn1aP39689 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms