Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Gm37466-201ENSMUST00000195692 652 ntBASIC13.8□□□□□ -0.2
Nedd1P33215 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.8□□□□□ -0.2
Nedd1P33215 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.8□□□□□ -0.2
Nedd1P33215 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.8□□□□□ -0.2
Nedd1P33215 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.8□□□□□ -0.2
Nedd1P33215 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nedd1P33215 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nedd1P33215 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.79□□□□□ -0.2
Nedd1P33215 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nedd1P33215 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.79□□□□□ -0.2
Nedd1P33215 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.79□□□□□ -0.2
Nedd1P33215 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm7857-201ENSMUST00000117957 358 ntBASIC13.79□□□□□ -0.2
Nedd1P33215 Gm12380-201ENSMUST00000119012 544 ntBASIC13.79□□□□□ -0.2
Nedd1P33215 Gm14277-201ENSMUST00000121195 360 ntBASIC13.79□□□□□ -0.2
Nedd1P33215 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.79□□□□□ -0.2
Nedd1P33215 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm32390-201ENSMUST00000212713 1172 ntBASIC13.79□□□□□ -0.2
Nedd1P33215 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Nedd1P33215 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.79□□□□□ -0.2
Nedd1P33215 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.79□□□□□ -0.2
Nedd1P33215 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.79□□□□□ -0.2
Nedd1P33215 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.79□□□□□ -0.2
Nedd1P33215 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.79□□□□□ -0.2
Nedd1P33215 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.79□□□□□ -0.2
Nedd1P33215 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nedd1P33215 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nedd1P33215 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nedd1P33215 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nedd1P33215 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.78□□□□□ -0.2
Nedd1P33215 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.78□□□□□ -0.2
Nedd1P33215 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Gm4909-201ENSMUST00000118749 794 ntBASIC13.78□□□□□ -0.2
Nedd1P33215 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Nedd1P33215 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.78□□□□□ -0.2
Nedd1P33215 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.78□□□□□ -0.2
Nedd1P33215 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.78□□□□□ -0.2
Nedd1P33215 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nedd1P33215 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nedd1P33215 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Nedd1P33215 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.78□□□□□ -0.2
Nedd1P33215 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nedd1P33215 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nedd1P33215 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nedd1P33215 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nedd1P33215 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nedd1P33215 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nedd1P33215 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms