Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a11P31650 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.72□□□□□ -0.53
Slc6a11P31650 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Snord83b-201ENSMUST00000104546 94 ntBASIC11.72□□□□□ -0.53
Slc6a11P31650 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm15703-201ENSMUST00000120250 880 ntBASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm8099-201ENSMUST00000200510 742 ntBASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm6334-201ENSMUST00000207083 228 ntBASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.72□□□□□ -0.53
Slc6a11P31650 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.72□□□□□ -0.53
Slc6a11P31650 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Slc6a11P31650 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.72□□□□□ -0.53
Slc6a11P31650 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.71□□□□□ -0.53
Slc6a11P31650 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Slc6a11P31650 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.71□□□□□ -0.53
Slc6a11P31650 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Slc6a11P31650 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.71□□□□□ -0.53
Slc6a11P31650 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.71□□□□□ -0.53
Slc6a11P31650 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.71□□□□□ -0.53
Slc6a11P31650 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Slc6a11P31650 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Gm16296-201ENSMUST00000159905 325 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Gm16379-201ENSMUST00000161469 348 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Gm25927-201ENSMUST00000175058 117 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Gm26927-201ENSMUST00000182385 965 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Gm8762-201ENSMUST00000193486 339 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Gm37922-201ENSMUST00000195596 455 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Slc6a11P31650 Gm45865-201ENSMUST00000211815 945 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.71□□□□□ -0.53
Slc6a11P31650 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Slc6a11P31650 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Slc6a11P31650 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a11P31650 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a11P31650 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a11P31650 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Slc6a11P31650 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms