Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a1P31648 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a1P31648 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Gm11524-201ENSMUST00000119349 807 ntBASIC10.63□□□□□ -0.71
Slc6a1P31648 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.63□□□□□ -0.71
Slc6a1P31648 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Slc6a1P31648 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.63□□□□□ -0.71
Slc6a1P31648 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.63□□□□□ -0.71
Slc6a1P31648 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.63□□□□□ -0.71
Slc6a1P31648 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.63□□□□□ -0.71
Slc6a1P31648 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Slc6a1P31648 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a1P31648 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.63□□□□□ -0.71
Slc6a1P31648 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.63□□□□□ -0.71
Slc6a1P31648 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Slc6a1P31648 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Slc6a1P31648 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.62□□□□□ -0.71
Slc6a1P31648 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.62□□□□□ -0.71
Slc6a1P31648 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.62□□□□□ -0.71
Slc6a1P31648 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Mir686-201ENSMUST00000102174 109 ntBASIC10.62□□□□□ -0.71
Slc6a1P31648 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.62□□□□□ -0.71
Slc6a1P31648 Gm14760-201ENSMUST00000121831 999 ntBASIC10.62□□□□□ -0.71
Slc6a1P31648 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Gm28911-201ENSMUST00000188837 117 ntBASIC10.62□□□□□ -0.71
Slc6a1P31648 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.62□□□□□ -0.71
Slc6a1P31648 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.62□□□□□ -0.71
Slc6a1P31648 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.62□□□□□ -0.71
Slc6a1P31648 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Slc6a1P31648 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.61□□□□□ -0.71
Slc6a1P31648 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.61□□□□□ -0.71
Slc6a1P31648 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Slc6a1P31648 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.61□□□□□ -0.71
Slc6a1P31648 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Slc6a1P31648 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms