Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Vcam1P29533 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Vcam1P29533 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Vcam1P29533 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.12□□□□□ -0.15
Vcam1P29533 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.12□□□□□ -0.15
Vcam1P29533 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vcam1P29533 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vcam1P29533 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Vcam1P29533 Gm15004-201ENSMUST00000119192 630 ntBASIC14.11□□□□□ -0.15
Vcam1P29533 Gm15595-201ENSMUST00000120840 961 ntBASIC14.11□□□□□ -0.15
Vcam1P29533 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.11□□□□□ -0.15
Vcam1P29533 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.11□□□□□ -0.15
Vcam1P29533 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.11□□□□□ -0.15
Vcam1P29533 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.11□□□□□ -0.15
Vcam1P29533 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vcam1P29533 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.11□□□□□ -0.15
Vcam1P29533 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.11□□□□□ -0.15
Vcam1P29533 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcam1P29533 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vcam1P29533 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vcam1P29533 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Gm13809-201ENSMUST00000117921 597 ntBASIC14.1□□□□□ -0.15
Vcam1P29533 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.1□□□□□ -0.15
Vcam1P29533 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Gm5706-201ENSMUST00000181525 993 ntBASIC14.1□□□□□ -0.15
Vcam1P29533 Gm10774-201ENSMUST00000188689 204 ntBASIC14.1□□□□□ -0.15
Vcam1P29533 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.1□□□□□ -0.15
Vcam1P29533 Gm6905-201ENSMUST00000205729 511 ntBASIC14.1□□□□□ -0.15
Vcam1P29533 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.1□□□□□ -0.15
Vcam1P29533 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.1□□□□□ -0.15
Vcam1P29533 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vcam1P29533 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vcam1P29533 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcam1P29533 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Vcam1P29533 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vcam1P29533 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Vcam1P29533 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcam1P29533 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms