Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.82□□□□□ -0.2
Col2a1P28481 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col2a1P28481 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col2a1P28481 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Col2a1P28481 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col2a1P28481 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.82□□□□□ -0.2
Col2a1P28481 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col2a1P28481 Gm10731-201ENSMUST00000181171 448 ntBASIC13.82□□□□□ -0.2
Col2a1P28481 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col2a1P28481 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Col2a1P28481 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.82□□□□□ -0.2
Col2a1P28481 Gm9463-201ENSMUST00000206707 601 ntBASIC13.82□□□□□ -0.2
Col2a1P28481 Gm6108-201ENSMUST00000208365 367 ntBASIC13.82□□□□□ -0.2
Col2a1P28481 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.82□□□□□ -0.2
Col2a1P28481 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.82□□□□□ -0.2
Col2a1P28481 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.82□□□□□ -0.2
Col2a1P28481 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.82□□□□□ -0.2
Col2a1P28481 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col2a1P28481 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col2a1P28481 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.82□□□□□ -0.2
Col2a1P28481 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Gm14193-201ENSMUST00000105067 153 ntBASIC13.81□□□□□ -0.2
Col2a1P28481 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.81□□□□□ -0.2
Col2a1P28481 Gm10807-201ENSMUST00000177134 795 ntBASIC13.81□□□□□ -0.2
Col2a1P28481 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col2a1P28481 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col2a1P28481 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.81□□□□□ -0.2
Col2a1P28481 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.81□□□□□ -0.2
Col2a1P28481 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col2a1P28481 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.81□□□□□ -0.2
Col2a1P28481 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col2a1P28481 Gm12029-201ENSMUST00000120073 832 ntBASIC13.8□□□□□ -0.2
Col2a1P28481 Gm11246-201ENSMUST00000120880 345 ntBASIC13.8□□□□□ -0.2
Col2a1P28481 Gm14460-201ENSMUST00000121511 639 ntBASIC13.8□□□□□ -0.2
Col2a1P28481 Gm8737-201ENSMUST00000122208 642 ntBASIC13.8□□□□□ -0.2
Col2a1P28481 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col2a1P28481 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.8□□□□□ -0.2
Col2a1P28481 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.8□□□□□ -0.2
Col2a1P28481 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Col2a1P28481 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.8□□□□□ -0.2
Col2a1P28481 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.8□□□□□ -0.2
Col2a1P28481 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.8□□□□□ -0.2
Col2a1P28481 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.8□□□□□ -0.2
Col2a1P28481 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Col2a1P28481 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col2a1P28481 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.8□□□□□ -0.2
Col2a1P28481 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.8□□□□□ -0.2
Col2a1P28481 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col2a1P28481 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms