Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm18062-201ENSMUST00000208020 547 ntBASIC9.61□□□□□ -0.87
Ccl6P27784 Gm18055-201ENSMUST00000208254 547 ntBASIC9.61□□□□□ -0.87
Ccl6P27784 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Ccl6P27784 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccl6P27784 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.61□□□□□ -0.87
Ccl6P27784 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.61□□□□□ -0.87
Ccl6P27784 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Ccl6P27784 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccl6P27784 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ccl6P27784 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Ccl6P27784 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.61□□□□□ -0.87
Ccl6P27784 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.61□□□□□ -0.87
Ccl6P27784 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ccl6P27784 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccl6P27784 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.6□□□□□ -0.87
Ccl6P27784 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Ccl6P27784 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccl6P27784 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ccl6P27784 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccl6P27784 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.6□□□□□ -0.87
Ccl6P27784 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccl6P27784 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm12957-201ENSMUST00000117835 377 ntBASIC9.6□□□□□ -0.87
Ccl6P27784 Gm11964-201ENSMUST00000120982 444 ntBASIC9.6□□□□□ -0.87
Ccl6P27784 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm16379-201ENSMUST00000161469 348 ntBASIC9.6□□□□□ -0.87
Ccl6P27784 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.6□□□□□ -0.87
Ccl6P27784 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccl6P27784 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm8762-201ENSMUST00000193486 339 ntBASIC9.6□□□□□ -0.87
Ccl6P27784 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.6□□□□□ -0.87
Ccl6P27784 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm9823-201ENSMUST00000051212 327 ntBASIC9.6□□□□□ -0.87
Ccl6P27784 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ccl6P27784 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Mbnl2-204ENSMUST00000227012 2390 ntBASIC9.6□□□□□ -0.87
Ccl6P27784 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Ccl6P27784 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Gm5422-201ENSMUST00000050717 2721 ntBASIC9.6□□□□□ -0.87
Ccl6P27784 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ccl6P27784 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Ccl6P27784 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ccl6P27784 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl6P27784 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms