Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm3961-201ENSMUST00000204425 994 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.44□□□□□ -0.58
Cd40lgP27548 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.43□□□□□ -0.58
Cd40lgP27548 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Gm11793-201ENSMUST00000120433 981 ntBASIC11.43□□□□□ -0.58
Cd40lgP27548 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Gm43179-201ENSMUST00000198797 275 ntBASIC11.43□□□□□ -0.58
Cd40lgP27548 Gm32025-201ENSMUST00000217960 307 ntBASIC11.43□□□□□ -0.58
Cd40lgP27548 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.43□□□□□ -0.58
Cd40lgP27548 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.43□□□□□ -0.58
Cd40lgP27548 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Cd40lgP27548 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cd40lgP27548 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm4986-201ENSMUST00000119731 549 ntBASIC11.42□□□□□ -0.58
Cd40lgP27548 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm27501-201ENSMUST00000183599 107 ntBASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.42□□□□□ -0.58
Cd40lgP27548 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.42□□□□□ -0.58
Cd40lgP27548 Gm45925-201ENSMUST00000218882 744 ntBASIC11.42□□□□□ -0.58
Cd40lgP27548 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cd40lgP27548 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms