Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm9996-201ENSMUST00000070359 913 ntBASIC12.7□□□□□ -0.38
Nfkb1P25799 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.7□□□□□ -0.38
Nfkb1P25799 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.7□□□□□ -0.38
Nfkb1P25799 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.7□□□□□ -0.38
Nfkb1P25799 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nfkb1P25799 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nfkb1P25799 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.69□□□□□ -0.38
Nfkb1P25799 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Gm24934-201ENSMUST00000103764 111 ntBASIC12.69□□□□□ -0.38
Nfkb1P25799 Gm23200-201ENSMUST00000104379 132 ntBASIC12.69□□□□□ -0.38
Nfkb1P25799 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.69□□□□□ -0.38
Nfkb1P25799 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.69□□□□□ -0.38
Nfkb1P25799 B9d1os-201ENSMUST00000137010 674 ntBASIC12.69□□□□□ -0.38
Nfkb1P25799 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Gm23119-201ENSMUST00000158610 140 ntBASIC12.69□□□□□ -0.38
Nfkb1P25799 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Gm25732-201ENSMUST00000175168 60 ntBASIC12.69□□□□□ -0.38
Nfkb1P25799 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Gm19891-201ENSMUST00000189771 303 ntBASIC12.69□□□□□ -0.38
Nfkb1P25799 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.69□□□□□ -0.38
Nfkb1P25799 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nfkb1P25799 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.69□□□□□ -0.38
Nfkb1P25799 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.68□□□□□ -0.38
Nfkb1P25799 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nfkb1P25799 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.68□□□□□ -0.38
Nfkb1P25799 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nfkb1P25799 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.68□□□□□ -0.38
Nfkb1P25799 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Mir6979-201ENSMUST00000183927 56 ntBASIC12.68□□□□□ -0.38
Nfkb1P25799 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.68□□□□□ -0.38
Nfkb1P25799 Gm37666-201ENSMUST00000194110 866 ntBASIC12.68□□□□□ -0.38
Nfkb1P25799 Gm44958-201ENSMUST00000203734 736 ntBASIC12.68□□□□□ -0.38
Nfkb1P25799 Gm19994-201ENSMUST00000217086 586 ntBASIC12.68□□□□□ -0.38
Nfkb1P25799 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.68□□□□□ -0.38
Nfkb1P25799 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nfkb1P25799 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms