Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.59□□□□□ -0.55
Clk1P22518 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.59□□□□□ -0.55
Clk1P22518 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Gm13492-201ENSMUST00000119772 665 ntBASIC11.59□□□□□ -0.55
Clk1P22518 Gm14660-201ENSMUST00000119809 575 ntBASIC11.59□□□□□ -0.55
Clk1P22518 Snora78-201ENSMUST00000158630 128 ntBASIC11.59□□□□□ -0.55
Clk1P22518 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.59□□□□□ -0.55
Clk1P22518 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clk1P22518 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.59□□□□□ -0.55
Clk1P22518 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Clk1P22518 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clk1P22518 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clk1P22518 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Clk1P22518 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Clk1P22518 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Clk1P22518 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Clk1P22518 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Clk1P22518 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.58□□□□□ -0.56
Clk1P22518 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.58□□□□□ -0.56
Clk1P22518 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Clk1P22518 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Clk1P22518 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Clk1P22518 Gm12363-201ENSMUST00000122250 668 ntBASIC11.58□□□□□ -0.56
Clk1P22518 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.58□□□□□ -0.56
Clk1P22518 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.58□□□□□ -0.56
Clk1P22518 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Clk1P22518 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Clk1P22518 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.58□□□□□ -0.56
Clk1P22518 Gm32025-201ENSMUST00000217960 307 ntBASIC11.58□□□□□ -0.56
Clk1P22518 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Clk1P22518 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Clk1P22518 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Clk1P22518 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Clk1P22518 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Clk1P22518 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Clk1P22518 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Clk1P22518 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.58□□□□□ -0.56
Clk1P22518 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Clk1P22518 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Clk1P22518 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Clk1P22518 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Clk1P22518 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.57□□□□□ -0.56
Clk1P22518 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.57□□□□□ -0.56
Clk1P22518 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.57□□□□□ -0.56
Clk1P22518 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.57□□□□□ -0.56
Clk1P22518 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.57□□□□□ -0.56
Clk1P22518 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.57□□□□□ -0.56
Clk1P22518 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.57□□□□□ -0.56
Clk1P22518 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Clk1P22518 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Clk1P22518 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms