Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm3P21107 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm3P21107 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm3P21107 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tpm3P21107 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Tpm3P21107 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.8□□□□□ -0.2
Tpm3P21107 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tpm3P21107 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.79□□□□□ -0.2
Tpm3P21107 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tpm3P21107 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tpm3P21107 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tpm3P21107 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tpm3P21107 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.79□□□□□ -0.2
Tpm3P21107 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Gm27838-201ENSMUST00000184829 128 ntBASIC13.79□□□□□ -0.2
Tpm3P21107 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.79□□□□□ -0.2
Tpm3P21107 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.79□□□□□ -0.2
Tpm3P21107 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Tpm3P21107 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Tpm3P21107 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm3P21107 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tpm3P21107 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tpm3P21107 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.78□□□□□ -0.2
Tpm3P21107 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.78□□□□□ -0.2
Tpm3P21107 Gm5354-201ENSMUST00000182417 973 ntBASIC13.78□□□□□ -0.2
Tpm3P21107 Gm28760-201ENSMUST00000185995 736 ntBASIC13.78□□□□□ -0.2
Tpm3P21107 Gm44882-201ENSMUST00000205702 802 ntBASIC13.78□□□□□ -0.2
Tpm3P21107 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tpm3P21107 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm3P21107 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tpm3P21107 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tpm3P21107 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Tpm3P21107 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Tpm3P21107 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tpm3P21107 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Tpm3P21107 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm3P21107 Gm24231-201ENSMUST00000104315 133 ntBASIC13.77□□□□□ -0.21
Tpm3P21107 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm3P21107 Gm14350-201ENSMUST00000116642 640 ntBASIC13.77□□□□□ -0.21
Tpm3P21107 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.77□□□□□ -0.21
Tpm3P21107 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm3P21107 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tpm3P21107 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Tpm3P21107 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Tpm3P21107 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.77□□□□□ -0.21
Tpm3P21107 Gm27306-201ENSMUST00000183970 107 ntBASIC13.77□□□□□ -0.21
Tpm3P21107 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm3P21107 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Tpm3P21107 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Tpm3P21107 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.77□□□□□ -0.21
Tpm3P21107 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm3P21107 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm3P21107 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Tpm3P21107 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm3P21107 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms