Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.72□□□□□ -0.37
Rb1P13405 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rb1P13405 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.71□□□□□ -0.37
Rb1P13405 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rb1P13405 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.71□□□□□ -0.37
Rb1P13405 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Rb1P13405 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.71□□□□□ -0.37
Rb1P13405 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Gm14130-201ENSMUST00000118417 987 ntBASIC12.71□□□□□ -0.37
Rb1P13405 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.71□□□□□ -0.37
Rb1P13405 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.71□□□□□ -0.37
Rb1P13405 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.71□□□□□ -0.37
Rb1P13405 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.71□□□□□ -0.37
Rb1P13405 Gm32025-201ENSMUST00000217960 307 ntBASIC12.71□□□□□ -0.37
Rb1P13405 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.71□□□□□ -0.37
Rb1P13405 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rb1P13405 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rb1P13405 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rb1P13405 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rb1P13405 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.71□□□□□ -0.38
Rb1P13405 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rb1P13405 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Rb1P13405 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rb1P13405 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Rb1P13405 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.7□□□□□ -0.38
Rb1P13405 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rb1P13405 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rb1P13405 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.7□□□□□ -0.38
Rb1P13405 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rb1P13405 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.7□□□□□ -0.38
Rb1P13405 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Rb1P13405 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Gm27341-201ENSMUST00000183570 106 ntBASIC12.7□□□□□ -0.38
Rb1P13405 Gm2260-201ENSMUST00000184965 657 ntBASIC12.7□□□□□ -0.38
Rb1P13405 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.7□□□□□ -0.38
Rb1P13405 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Rb1P13405 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rb1P13405 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms