Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Zfp28P10078 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Zfp28P10078 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Zfp28P10078 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Zfp28P10078 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Zfp28P10078 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.32□□□□□ -0.6
Zfp28P10078 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.32□□□□□ -0.6
Zfp28P10078 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.32□□□□□ -0.6
Zfp28P10078 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.32□□□□□ -0.6
Zfp28P10078 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.32□□□□□ -0.6
Zfp28P10078 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.32□□□□□ -0.6
Zfp28P10078 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.32□□□□□ -0.6
Zfp28P10078 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Zfp28P10078 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Zfp28P10078 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Zfp28P10078 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Zfp28P10078 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Zfp28P10078 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Zfp28P10078 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Zfp28P10078 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Zfp28P10078 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Zfp28P10078 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Zfp28P10078 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Zfp28P10078 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.31□□□□□ -0.6
Zfp28P10078 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.31□□□□□ -0.6
Zfp28P10078 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Zfp28P10078 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Zfp28P10078 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Zfp28P10078 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Zfp28P10078 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Gm13369-201ENSMUST00000119442 987 ntBASIC11.31□□□□□ -0.6
Zfp28P10078 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.31□□□□□ -0.6
Zfp28P10078 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Zfp28P10078 Proscos-202ENSMUST00000178990 666 ntBASIC11.31□□□□□ -0.6
Zfp28P10078 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.31□□□□□ -0.6
Zfp28P10078 Gm8227-201ENSMUST00000223306 571 ntBASIC11.31□□□□□ -0.6
Zfp28P10078 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.31□□□□□ -0.6
Zfp28P10078 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.31□□□□□ -0.6
Zfp28P10078 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Zfp28P10078 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Zfp28P10078 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.31□□□□□ -0.6
Zfp28P10078 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.31□□□□□ -0.6
Zfp28P10078 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Zfp28P10078 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Zfp28P10078 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Zfp28P10078 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Zfp28P10078 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Zfp28P10078 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Zfp28P10078 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Zfp28P10078 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms