Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxb3P09026 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm25998-201ENSMUST00000175397 53 ntBASIC12.42□□□□□ -0.42
Hoxb3P09026 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm3096-201ENSMUST00000185770 364 ntBASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm9645-201ENSMUST00000197131 792 ntBASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm45500-201ENSMUST00000211676 803 ntBASIC12.42□□□□□ -0.42
Hoxb3P09026 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.42□□□□□ -0.42
Hoxb3P09026 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxb3P09026 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.41□□□□□ -0.42
Hoxb3P09026 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm5599-201ENSMUST00000209602 788 ntBASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Olfr1153-201ENSMUST00000052300 957 ntBASIC12.41□□□□□ -0.42
Hoxb3P09026 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.41□□□□□ -0.42
Hoxb3P09026 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxb3P09026 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxb3P09026 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hoxb3P09026 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.4□□□□□ -0.42
Hoxb3P09026 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.4□□□□□ -0.42
Hoxb3P09026 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms