Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.07□□□□□ -0.32
TnfP06804 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.07□□□□□ -0.32
TnfP06804 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TnfP06804 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TnfP06804 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TnfP06804 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.07□□□□□ -0.32
TnfP06804 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TnfP06804 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.07□□□□□ -0.32
TnfP06804 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.07□□□□□ -0.32
TnfP06804 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TnfP06804 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.06□□□□□ -0.32
TnfP06804 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.06□□□□□ -0.32
TnfP06804 Gm7722-201ENSMUST00000120646 741 ntBASIC13.06□□□□□ -0.32
TnfP06804 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.06□□□□□ -0.32
TnfP06804 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.06□□□□□ -0.32
TnfP06804 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.06□□□□□ -0.32
TnfP06804 Gm18711-201ENSMUST00000199341 750 ntBASIC13.06□□□□□ -0.32
TnfP06804 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.06□□□□□ -0.32
TnfP06804 Gm5455-201ENSMUST00000058710 715 ntBASIC13.06□□□□□ -0.32
TnfP06804 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TnfP06804 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.06□□□□□ -0.32
TnfP06804 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.06□□□□□ -0.32
TnfP06804 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.06□□□□□ -0.32
TnfP06804 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TnfP06804 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TnfP06804 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TnfP06804 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TnfP06804 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
TnfP06804 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.05□□□□□ -0.32
TnfP06804 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.05□□□□□ -0.32
TnfP06804 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.05□□□□□ -0.32
TnfP06804 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.05□□□□□ -0.32
TnfP06804 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TnfP06804 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TnfP06804 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
TnfP06804 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TnfP06804 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TnfP06804 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms