Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.74□□□□□ -0.37
PrnpP04925 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.74□□□□□ -0.37
PrnpP04925 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.74□□□□□ -0.37
PrnpP04925 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.74□□□□□ -0.37
PrnpP04925 Gm9797-202ENSMUST00000218003 294 ntBASIC12.74□□□□□ -0.37
PrnpP04925 Gm18041-201ENSMUST00000218210 618 ntBASIC12.74□□□□□ -0.37
PrnpP04925 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.74□□□□□ -0.37
PrnpP04925 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.74□□□□□ -0.37
PrnpP04925 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
PrnpP04925 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PrnpP04925 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrnpP04925 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
PrnpP04925 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
PrnpP04925 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PrnpP04925 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.73□□□□□ -0.37
PrnpP04925 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
PrnpP04925 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PrnpP04925 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.73□□□□□ -0.37
PrnpP04925 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PrnpP04925 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PrnpP04925 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Gm15573-201ENSMUST00000119487 540 ntBASIC12.73□□□□□ -0.37
PrnpP04925 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.73□□□□□ -0.37
PrnpP04925 Gm45398-201ENSMUST00000210561 165 ntBASIC12.73□□□□□ -0.37
PrnpP04925 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.73□□□□□ -0.37
PrnpP04925 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.73□□□□□ -0.37
PrnpP04925 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.73□□□□□ -0.37
PrnpP04925 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.73□□□□□ -0.37
PrnpP04925 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PrnpP04925 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
PrnpP04925 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
PrnpP04925 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
PrnpP04925 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PrnpP04925 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PrnpP04925 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrnpP04925 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PrnpP04925 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.72□□□□□ -0.37
PrnpP04925 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.72□□□□□ -0.37
PrnpP04925 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PrnpP04925 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms