Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Gm11930-201ENSMUST00000117788 190 ntBASIC10.37□□□□□ -0.75
Hoxa3P02831 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.37□□□□□ -0.75
Hoxa3P02831 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Gm37466-201ENSMUST00000195692 652 ntBASIC10.37□□□□□ -0.75
Hoxa3P02831 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.37□□□□□ -0.75
Hoxa3P02831 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Mir433-201ENSMUST00000093564 124 ntBASIC10.37□□□□□ -0.75
Hoxa3P02831 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.37□□□□□ -0.75
Hoxa3P02831 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm15547-201ENSMUST00000122152 333 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.36□□□□□ -0.75
Hoxa3P02831 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.36□□□□□ -0.75
Hoxa3P02831 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm37201-201ENSMUST00000191845 523 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm13097-201ENSMUST00000210722 397 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.36□□□□□ -0.75
Hoxa3P02831 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hoxa3P02831 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.36□□□□□ -0.75
Hoxa3P02831 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.35□□□□□ -0.75
Hoxa3P02831 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hoxa3P02831 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms