Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.84□□□□□ -0.51
Hcn1O88704 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.84□□□□□ -0.51
Hcn1O88704 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.84□□□□□ -0.51
Hcn1O88704 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.84□□□□□ -0.51
Hcn1O88704 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Gm7399-201ENSMUST00000032395 858 ntBASIC11.84□□□□□ -0.51
Hcn1O88704 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hcn1O88704 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Hcn1O88704 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.84□□□□□ -0.51
Hcn1O88704 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.84□□□□□ -0.51
Hcn1O88704 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hcn1O88704 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Hcn1O88704 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hcn1O88704 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hcn1O88704 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hcn1O88704 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.83□□□□□ -0.52
Hcn1O88704 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Hcn1O88704 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Gm11793-201ENSMUST00000120433 981 ntBASIC11.83□□□□□ -0.52
Hcn1O88704 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Hcn1O88704 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Gm23363-201ENSMUST00000175024 79 ntBASIC11.83□□□□□ -0.52
Hcn1O88704 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.83□□□□□ -0.52
Hcn1O88704 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.83□□□□□ -0.52
Hcn1O88704 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Hcn1O88704 Gm5781-201ENSMUST00000219792 443 ntBASIC11.83□□□□□ -0.52
Hcn1O88704 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hcn1O88704 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hcn1O88704 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.83□□□□□ -0.52
Hcn1O88704 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hcn1O88704 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hcn1O88704 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.82□□□□□ -0.52
Hcn1O88704 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hcn1O88704 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hcn1O88704 Gm6023-201ENSMUST00000118217 606 ntBASIC11.82□□□□□ -0.52
Hcn1O88704 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.82□□□□□ -0.52
Hcn1O88704 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.82□□□□□ -0.52
Hcn1O88704 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.82□□□□□ -0.52
Hcn1O88704 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.82□□□□□ -0.52
Hcn1O88704 Gm42627-201ENSMUST00000197347 224 ntBASIC11.82□□□□□ -0.52
Hcn1O88704 Gm45331-201ENSMUST00000209868 554 ntBASIC11.82□□□□□ -0.52
Hcn1O88704 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.82□□□□□ -0.52
Hcn1O88704 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hcn1O88704 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Hcn1O88704 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.82□□□□□ -0.52
Hcn1O88704 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.82□□□□□ -0.52
Hcn1O88704 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hcn1O88704 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms