Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.12□□□□□ -0.47
ClppO88696 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.12□□□□□ -0.47
ClppO88696 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.12□□□□□ -0.47
ClppO88696 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.12□□□□□ -0.47
ClppO88696 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
ClppO88696 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.12□□□□□ -0.47
ClppO88696 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.12□□□□□ -0.47
ClppO88696 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.12□□□□□ -0.47
ClppO88696 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
ClppO88696 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.12□□□□□ -0.47
ClppO88696 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ClppO88696 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.12□□□□□ -0.47
ClppO88696 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.11□□□□□ -0.47
ClppO88696 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.11□□□□□ -0.47
ClppO88696 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.11□□□□□ -0.47
ClppO88696 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ClppO88696 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClppO88696 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Gm12058-201ENSMUST00000118614 437 ntBASIC12.11□□□□□ -0.47
ClppO88696 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
ClppO88696 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.11□□□□□ -0.47
ClppO88696 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.11□□□□□ -0.47
ClppO88696 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.11□□□□□ -0.47
ClppO88696 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.11□□□□□ -0.47
ClppO88696 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.11□□□□□ -0.47
ClppO88696 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClppO88696 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClppO88696 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
ClppO88696 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.11□□□□□ -0.47
ClppO88696 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.11□□□□□ -0.47
ClppO88696 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ClppO88696 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ClppO88696 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.11□□□□□ -0.47
ClppO88696 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ClppO88696 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ClppO88696 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.1□□□□□ -0.47
ClppO88696 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClppO88696 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms