Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.43□□□□□ -0.42
Chrna4O70174 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.43□□□□□ -0.42
Chrna4O70174 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chrna4O70174 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.43□□□□□ -0.42
Chrna4O70174 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chrna4O70174 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.43□□□□□ -0.42
Chrna4O70174 Cog3-203ENSMUST00000227473 4197 ntBASIC12.43□□□□□ -0.42
Chrna4O70174 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chrna4O70174 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chrna4O70174 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.43□□□□□ -0.42
Chrna4O70174 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.43□□□□□ -0.42
Chrna4O70174 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chrna4O70174 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chrna4O70174 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chrna4O70174 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chrna4O70174 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.42□□□□□ -0.42
Chrna4O70174 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chrna4O70174 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.42□□□□□ -0.42
Chrna4O70174 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chrna4O70174 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Gm24934-201ENSMUST00000103764 111 ntBASIC12.42□□□□□ -0.42
Chrna4O70174 Gm12241-201ENSMUST00000118330 726 ntBASIC12.42□□□□□ -0.42
Chrna4O70174 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chrna4O70174 Gm2991-201ENSMUST00000173338 480 ntBASIC12.42□□□□□ -0.42
Chrna4O70174 Gm27390-201ENSMUST00000184516 176 ntBASIC12.42□□□□□ -0.42
Chrna4O70174 Gm4034-201ENSMUST00000187674 480 ntBASIC12.42□□□□□ -0.42
Chrna4O70174 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.42□□□□□ -0.42
Chrna4O70174 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Chrna4O70174 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.42□□□□□ -0.42
Chrna4O70174 Gm9368-201ENSMUST00000219348 831 ntBASIC12.42□□□□□ -0.42
Chrna4O70174 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chrna4O70174 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.42□□□□□ -0.42
Chrna4O70174 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chrna4O70174 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.42□□□□□ -0.42
Chrna4O70174 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.42□□□□□ -0.42
Chrna4O70174 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.42□□□□□ -0.42
Chrna4O70174 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chrna4O70174 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.41□□□□□ -0.42
Chrna4O70174 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.41□□□□□ -0.42
Chrna4O70174 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.41□□□□□ -0.42
Chrna4O70174 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.41□□□□□ -0.42
Chrna4O70174 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Chrna4O70174 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Gm24830-201ENSMUST00000102024 166 ntBASIC12.41□□□□□ -0.42
Chrna4O70174 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Chrna4O70174 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 Gm30285-201ENSMUST00000214614 422 ntBASIC12.41□□□□□ -0.42
Chrna4O70174 Cts7-204ENSMUST00000225321 1257 ntBASIC12.41□□□□□ -0.42
Chrna4O70174 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chrna4O70174 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chrna4O70174 Gm26232-201ENSMUST00000083360 166 ntBASIC12.41□□□□□ -0.42
Chrna4O70174 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.41□□□□□ -0.42
Chrna4O70174 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chrna4O70174 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chrna4O70174 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chrna4O70174 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chrna4O70174 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms