Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Limk2O54785 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Limk2O54785 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Limk2O54785 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Limk2O54785 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.53□□□□□ -0.4
Limk2O54785 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Limk2O54785 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Limk2O54785 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Limk2O54785 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.52□□□□□ -0.4
Limk2O54785 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Limk2O54785 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Limk2O54785 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Limk2O54785 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Gm28882-201ENSMUST00000185504 314 ntBASIC12.52□□□□□ -0.41
Limk2O54785 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 AA914427-201ENSMUST00000193194 1166 ntBASIC12.52□□□□□ -0.41
Limk2O54785 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.52□□□□□ -0.41
Limk2O54785 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.52□□□□□ -0.41
Limk2O54785 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Limk2O54785 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Limk2O54785 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Limk2O54785 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Limk2O54785 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.52□□□□□ -0.41
Limk2O54785 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.52□□□□□ -0.41
Limk2O54785 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.52□□□□□ -0.41
Limk2O54785 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Limk2O54785 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.51□□□□□ -0.41
Limk2O54785 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Limk2O54785 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Limk2O54785 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.51□□□□□ -0.41
Limk2O54785 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.51□□□□□ -0.41
Limk2O54785 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.51□□□□□ -0.41
Limk2O54785 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Limk2O54785 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.51□□□□□ -0.41
Limk2O54785 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Limk2O54785 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Limk2O54785 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.51□□□□□ -0.41
Limk2O54785 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.51□□□□□ -0.41
Limk2O54785 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Limk2O54785 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms