Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Npc1O35604 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.05□□□□□ -0.48
Npc1O35604 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Npc1O35604 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Npc1O35604 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Npc1O35604 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.05□□□□□ -0.48
Npc1O35604 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.05□□□□□ -0.48
Npc1O35604 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Npc1O35604 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Npc1O35604 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.05□□□□□ -0.48
Npc1O35604 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.04□□□□□ -0.48
Npc1O35604 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.04□□□□□ -0.48
Npc1O35604 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Npc1O35604 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Gm23270-201ENSMUST00000104055 131 ntBASIC12.04□□□□□ -0.48
Npc1O35604 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.04□□□□□ -0.48
Npc1O35604 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Npc1O35604 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.04□□□□□ -0.48
Npc1O35604 Gm27046-201ENSMUST00000182160 463 ntBASIC12.04□□□□□ -0.48
Npc1O35604 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.04□□□□□ -0.48
Npc1O35604 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.04□□□□□ -0.48
Npc1O35604 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Npc1O35604 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.04□□□□□ -0.48
Npc1O35604 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.04□□□□□ -0.48
Npc1O35604 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Npc1O35604 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.04□□□□□ -0.48
Npc1O35604 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Npc1O35604 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.04□□□□□ -0.48
Npc1O35604 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.04□□□□□ -0.48
Npc1O35604 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Npc1O35604 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.04□□□□□ -0.48
Npc1O35604 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Npc1O35604 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.03□□□□□ -0.48
Npc1O35604 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Npc1O35604 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Npc1O35604 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Npc1O35604 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Npc1O35604 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.03□□□□□ -0.48
Npc1O35604 Gm14109-201ENSMUST00000118814 309 ntBASIC12.03□□□□□ -0.48
Npc1O35604 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.03□□□□□ -0.48
Npc1O35604 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.03□□□□□ -0.48
Npc1O35604 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.03□□□□□ -0.48
Npc1O35604 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.03□□□□□ -0.48
Npc1O35604 Gm6082-201ENSMUST00000215204 454 ntBASIC12.03□□□□□ -0.48
Npc1O35604 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.03□□□□□ -0.48
Npc1O35604 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.03□□□□□ -0.48
Npc1O35604 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Npc1O35604 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms