Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC18.61■□□□□ 0.57
Polr1aO35134 Grk6-205ENSMUST00000224653 2976 ntBASIC18.61■□□□□ 0.57
Polr1aO35134 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Mir6407-201ENSMUST00000184510 101 ntBASIC18.61■□□□□ 0.57
Polr1aO35134 Gm44124-201ENSMUST00000204159 472 ntBASIC18.61■□□□□ 0.57
Polr1aO35134 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
Polr1aO35134 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC18.61■□□□□ 0.57
Polr1aO35134 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Polr1aO35134 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Polr1aO35134 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Gm36970-201ENSMUST00000193688 1859 ntBASIC18.61■□□□□ 0.57
Polr1aO35134 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Polr1aO35134 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC18.6■□□□□ 0.57
Polr1aO35134 Gm23105-201ENSMUST00000083719 134 ntBASIC18.6■□□□□ 0.57
Polr1aO35134 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Polr1aO35134 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.6■□□□□ 0.57
Polr1aO35134 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Map1b-203ENSMUST00000223725 2669 ntBASIC18.6■□□□□ 0.57
Polr1aO35134 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Polr1aO35134 Gm14892-201ENSMUST00000117636 267 ntBASIC18.6■□□□□ 0.57
Polr1aO35134 Gm14441-201ENSMUST00000121960 540 ntBASIC18.6■□□□□ 0.57
Polr1aO35134 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC18.6■□□□□ 0.57
Polr1aO35134 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC18.6■□□□□ 0.57
Polr1aO35134 AC124457.1-201ENSMUST00000198845 120 ntBASIC18.6■□□□□ 0.57
Polr1aO35134 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC18.6■□□□□ 0.57
Polr1aO35134 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 CT009546.1-201ENSMUST00000222573 1120 ntBASIC18.6■□□□□ 0.57
Polr1aO35134 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Polr1aO35134 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Polr1aO35134 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Polr1aO35134 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Polr1aO35134 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Gm4900-201ENSMUST00000222046 1628 ntBASIC18.59■□□□□ 0.57
Polr1aO35134 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC18.59■□□□□ 0.57
Polr1aO35134 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Polr1aO35134 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC18.59■□□□□ 0.57
Polr1aO35134 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC18.59■□□□□ 0.57
Polr1aO35134 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC18.59■□□□□ 0.57
Polr1aO35134 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Gm17798-201ENSMUST00000182282 1035 ntBASIC18.59■□□□□ 0.57
Polr1aO35134 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC18.59■□□□□ 0.57
Polr1aO35134 Lgi3-203ENSMUST00000226548 1001 ntBASIC18.59■□□□□ 0.57
Polr1aO35134 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC18.59■□□□□ 0.57
Polr1aO35134 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Polr1aO35134 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Polr1aO35134 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC18.58■□□□□ 0.57
Polr1aO35134 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Polr1aO35134 Gm15172-201ENSMUST00000118945 1046 ntBASIC18.58■□□□□ 0.57
Polr1aO35134 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC18.58■□□□□ 0.57
Polr1aO35134 Gm26047-201ENSMUST00000157308 113 ntBASIC18.58■□□□□ 0.57
Polr1aO35134 Gm24398-201ENSMUST00000157870 109 ntBASIC18.58■□□□□ 0.57
Polr1aO35134 Mir8093-201ENSMUST00000185043 137 ntBASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms