Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trove2O08848 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trove2O08848 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trove2O08848 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trove2O08848 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trove2O08848 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trove2O08848 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Trove2O08848 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trove2O08848 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trove2O08848 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trove2O08848 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trove2O08848 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.69□□□□□ -0.38
Trove2O08848 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.68□□□□□ -0.38
Trove2O08848 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trove2O08848 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trove2O08848 Gm13612-201ENSMUST00000119276 390 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Trove2O08848 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.68□□□□□ -0.38
Trove2O08848 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.68□□□□□ -0.38
Trove2O08848 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.68□□□□□ -0.38
Trove2O08848 Gm9794-201ENSMUST00000202370 423 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Gm7287-201ENSMUST00000205267 602 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.68□□□□□ -0.38
Trove2O08848 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Gm5356-201ENSMUST00000093326 615 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trove2O08848 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trove2O08848 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trove2O08848 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trove2O08848 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.68□□□□□ -0.38
Trove2O08848 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trove2O08848 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trove2O08848 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.68□□□□□ -0.38
Trove2O08848 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trove2O08848 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trove2O08848 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.67□□□□□ -0.38
Trove2O08848 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.67□□□□□ -0.38
Trove2O08848 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.67□□□□□ -0.38
Trove2O08848 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trove2O08848 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trove2O08848 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms