Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sec22bO08547 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sec22bO08547 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sec22bO08547 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Sec22bO08547 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sec22bO08547 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sec22bO08547 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Gm13315-201ENSMUST00000120376 991 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Gm16379-201ENSMUST00000161469 348 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.18□□□□□ -0.46
Sec22bO08547 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 Gm5745-201ENSMUST00000183748 313 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Gm27243-201ENSMUST00000183964 521 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 Gm7063-201ENSMUST00000186840 981 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 Gm8762-201ENSMUST00000193486 339 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Gm45930-201ENSMUST00000221330 292 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Snora73a-201ENSMUST00000082453 205 ntBASIC12.18□□□□□ -0.46
Sec22bO08547 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sec22bO08547 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.18□□□□□ -0.46
Sec22bO08547 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sec22bO08547 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.18□□□□□ -0.46
Sec22bO08547 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.18□□□□□ -0.46
Sec22bO08547 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec22bO08547 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Sec22bO08547 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sec22bO08547 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.17□□□□□ -0.46
Sec22bO08547 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Sec22bO08547 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Sec22bO08547 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sec22bO08547 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.17□□□□□ -0.46
Sec22bO08547 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Sec22bO08547 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sec22bO08547 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Gm3890-201ENSMUST00000182416 207 ntBASIC12.17□□□□□ -0.46
Sec22bO08547 Gm27390-201ENSMUST00000184516 176 ntBASIC12.17□□□□□ -0.46
Sec22bO08547 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Gm24136-201ENSMUST00000083374 165 ntBASIC12.17□□□□□ -0.46
Sec22bO08547 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec22bO08547 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.17□□□□□ -0.46
Sec22bO08547 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec22bO08547 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sec22bO08547 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec22bO08547 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec22bO08547 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec22bO08547 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.16□□□□□ -0.46
Sec22bO08547 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec22bO08547 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.16□□□□□ -0.46
Sec22bO08547 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec22bO08547 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Sec22bO08547 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec22bO08547 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.16□□□□□ -0.46
Sec22bO08547 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Sec22bO08547 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 1062.9 ms