Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gm8099-201ENSMUST00000200510 742 ntBASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shisa8J3QNX5 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Gm37042-201ENSMUST00000193816 581 ntBASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.22□□□□□ -0.61
Shisa8J3QNX5 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shisa8J3QNX5 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Gm13369-201ENSMUST00000119442 987 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms