Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm13369-201ENSMUST00000119442 987 ntBASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm12363-201ENSMUST00000122250 668 ntBASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm27243-201ENSMUST00000183964 521 ntBASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm4768-201ENSMUST00000206199 686 ntBASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm5356-201ENSMUST00000093326 615 ntBASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh1F7BJK1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm12203-201ENSMUST00000118235 598 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm12209-201ENSMUST00000120089 596 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm9002-201ENSMUST00000178437 499 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm9794-201ENSMUST00000202370 423 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm10012-201ENSMUST00000078252 192 ntBASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh1F7BJK1 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms